#include <ctype.h>#include <stdio.h>#include <string.h>#include <stdlib.h>#include "mitkLog.h"Go to the source code of this file.
Classes | |
| struct | functionMapEntry |
Typedefs | |
| typedef int(* | MainFuncPointer )(int, char *[]) |
Functions | |
| int | mitkDemonsRegistrationTest (int, char *[]) |
| int | mitkHistogramMatchingTest (int, char *[]) |
| int | mitkSymmetricForcesDemonsRegistrationTest (int, char *[]) |
| char * | lowercase (const char *string) |
| int | main (int ac, char *av[]) |
Variables | |
| functionMapEntry | cmakeGeneratedFunctionMapEntries [] |
| typedef int(* MainFuncPointer)(int, char *[]) |
Definition at line 18 of file MitkDeformableRegistrationTestDriver.cpp.
| char* lowercase | ( | const char * | string ) |
Definition at line 45 of file MitkDeformableRegistrationTestDriver.cpp.
{
char *new_string, *p;
#ifdef __cplusplus
new_string = static_cast<char *>(malloc(sizeof(char) *
static_cast<size_t>(strlen(string) + 1)));
#else
new_string = (char *)(malloc(sizeof(char) * (size_t)(strlen(string) + 1)));
#endif
if (!new_string)
{
return 0;
}
strcpy(new_string, string);
p = new_string;
while (*p != 0)
{
#ifdef __cplusplus
*p = static_cast<char>(tolower(*p));
#else
*p = (char)(tolower(*p));
#endif
++p;
}
return new_string;
}
| int main | ( | int | ac, |
| char * | av[] | ||
| ) |
Definition at line 75 of file MitkDeformableRegistrationTestDriver.cpp.
References functionMapEntry::func, lowercase(), functionMapEntry::name, mitk::LoggingBackend::Register(), and mitk::LoggingBackend::Unregister().
{
int i, NumTests, testNum, partial_match;
char *arg, *test_name;
int count;
int testToRun = -1;
for(count =0; cmakeGeneratedFunctionMapEntries[count].name != 0; count++)
{
}
NumTests = count;
/* If no test name was given */
/* process command line with user function. */
if (ac < 2)
{
/* Ask for a test. */
printf("Available tests:\n");
for (i =0; i < NumTests; ++i)
{
printf("%3d. %s\n", i, cmakeGeneratedFunctionMapEntries[i].name);
}
printf("To run a test, enter the test number: ");
fflush(stdout);
testNum = 0;
if( scanf("%d", &testNum) != 1 )
{
printf("Couldn't parse that input as a number\n");
return -1;
}
if (testNum >= NumTests)
{
printf("%3d is an invalid test number.\n", testNum);
return -1;
}
testToRun = testNum;
ac--;
av++;
}
partial_match = 0;
arg = 0;
/* If partial match is requested. */
if(testToRun == -1 && ac > 1)
{
partial_match = (strcmp(av[1], "-R") == 0) ? 1 : 0;
}
if (partial_match && ac < 3)
{
printf("-R needs an additional parameter.\n");
return -1;
}
if(testToRun == -1)
{
arg = lowercase(av[1 + partial_match]);
}
for (i =0; i < NumTests && testToRun == -1; ++i)
{
test_name = lowercase(cmakeGeneratedFunctionMapEntries[i].name);
if (partial_match && strstr(test_name, arg) != NULL)
{
testToRun = i;
ac -=2;
av += 2;
}
else if (!partial_match && strcmp(test_name, arg) == 0)
{
testToRun = i;
ac--;
av++;
}
free(test_name);
}
if(arg)
{
free(arg);
}
if(testToRun != -1)
{
int result;
mitk::LoggingBackend::Register(); ;
result = (*cmakeGeneratedFunctionMapEntries[testToRun].func)(ac, av);
mitk::LoggingBackend::Unregister();
return result;
}
/* Nothing was run, display the test names. */
printf("Available tests:\n");
for (i =0; i < NumTests; ++i)
{
printf("%3d. %s\n", i, cmakeGeneratedFunctionMapEntries[i].name);
}
printf("Failed: %s is an invalid test name.\n", av[1]);
return -1;
}
| int mitkDemonsRegistrationTest | ( | int | , |
| char * | [] | ||
| ) |
Definition at line 21 of file mitkDemonsRegistrationTest.cpp.
References EXIT_SUCCESS, mitk::DemonsRegistration::New(), and mitk::Image::New().
{
//Create Image out of nowhere
mitk::Image::Pointer image;
mitk::PixelType pt(typeid(int));
unsigned int dim[]={100,100,20};
std::cout << "Creating image: ";
image = mitk::Image::New();
//image->DebugOn();
image->Initialize(mitk::PixelType(typeid(int)), 3, dim);
int *p = (int*)image->GetData();
int size = dim[0]*dim[1]*dim[2];
int i;
for(i=0; i<size; ++i, ++p)
*p=i;
std::cout<<"[PASSED]"<<std::endl;
//Create second Image out of nowhere
mitk::Image::Pointer image2;
mitk::PixelType pt2(typeid(int));
unsigned int dim2[]={100,100,20};
std::cout << "Creating image: ";
image2 = mitk::Image::New();
//image->DebugOn();
image2->Initialize(mitk::PixelType(typeid(int)), 3, dim2);
int *p2 = (int*)image2->GetData();
int size2 = dim2[0]*dim2[1]*dim2[2];
int i2;
for(i2=0; i2<size2; ++i2, ++p2)
*p2=i2;
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Constructor: ";
mitk::DemonsRegistration::Pointer demonsRegistration = mitk::DemonsRegistration::New();
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set Reference Image: ";
demonsRegistration->SetReferenceImage(image);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set Moving Image: ";
demonsRegistration->SetInput(image2);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set number of iterations: ";
demonsRegistration->SetNumberOfIterations(5);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set standard deviation: ";
demonsRegistration->SetStandardDeviation(1.0);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set save deformation field: ";
demonsRegistration->SetSaveDeformationField(false);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set deformation field file name: ";
demonsRegistration->SetDeformationFieldFileName("TestField.mhd");
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set save result image: ";
demonsRegistration->SetSaveResult(false);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set result image file name: ";
demonsRegistration->SetResultFileName("TestResult.mhd");
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Perform registration: ";
demonsRegistration->Update();
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Get the result image: ";
mitk::Image::Pointer resultImage = demonsRegistration->GetOutput();
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Get the deformation field: ";
itk::Image<class itk::Vector<float, 3>,3>::Pointer deformationField = demonsRegistration->GetDeformationField();
std::cout<<"[PASSED]"<<std::endl;
return EXIT_SUCCESS;
}| int mitkHistogramMatchingTest | ( | int | , |
| char * | [] | ||
| ) |
Definition at line 21 of file mitkHistogramMatchingTest.cpp.
References EXIT_SUCCESS, mitk::HistogramMatching::New(), and mitk::Image::New().
{
//Create Image out of nowhere
mitk::Image::Pointer image;
mitk::PixelType pt(typeid(int));
unsigned int dim[]={100,100,20};
std::cout << "Creating image: ";
image = mitk::Image::New();
//image->DebugOn();
image->Initialize(mitk::PixelType(typeid(int)), 3, dim);
int *p = (int*)image->GetData();
int size = dim[0]*dim[1]*dim[2];
int i;
for(i=0; i<size; ++i, ++p)
*p=i;
std::cout<<"[PASSED]"<<std::endl;
//Create second Image out of nowhere
mitk::Image::Pointer image2;
mitk::PixelType pt2(typeid(int));
unsigned int dim2[]={100,100,20};
std::cout << "Creating image: ";
image2 = mitk::Image::New();
//image->DebugOn();
image2->Initialize(mitk::PixelType(typeid(int)), 3, dim2);
int *p2 = (int*)image2->GetData();
int size2 = dim2[0]*dim2[1]*dim2[2];
int i2;
for(i2=0; i2<size2; ++i2, ++p2)
*p2=i2;
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Constructor: ";
mitk::HistogramMatching::Pointer histogramMatching = mitk::HistogramMatching::New();
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set Reference Image: ";
histogramMatching->SetReferenceImage(image);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set Moving Image: ";
histogramMatching->SetInput(image2);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set number of match points: ";
histogramMatching->SetNumberOfMatchPoints(100);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set number of histogram levels: ";
histogramMatching->SetNumberOfHistogramLevels(8);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set threshold at mean intensity: ";
histogramMatching->SetThresholdAtMeanIntensity(true);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Perform histogram matching: ";
histogramMatching->Update();
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Get the result image: ";
mitk::Image::Pointer histimage = histogramMatching->GetOutput();
std::cout<<"[PASSED]"<<std::endl;
return EXIT_SUCCESS;
}| int mitkSymmetricForcesDemonsRegistrationTest | ( | int | , |
| char * | [] | ||
| ) |
Definition at line 21 of file mitkSymmetricForcesDemonsRegistrationTest.cpp.
References EXIT_SUCCESS, mitk::SymmetricForcesDemonsRegistration::New(), and mitk::Image::New().
{
//Create Image out of nowhere
mitk::Image::Pointer image;
mitk::PixelType pt(typeid(int));
unsigned int dim[]={100,100,20};
std::cout << "Creating image: ";
image = mitk::Image::New();
//image->DebugOn();
image->Initialize(mitk::PixelType(typeid(int)), 3, dim);
int *p = (int*)image->GetData();
int size = dim[0]*dim[1]*dim[2];
int i;
for(i=0; i<size; ++i, ++p)
*p=i;
std::cout<<"[PASSED]"<<std::endl;
//Create second Image out of nowhere
mitk::Image::Pointer image2;
mitk::PixelType pt2(typeid(int));
unsigned int dim2[]={100,100,20};
std::cout << "Creating image: ";
image2 = mitk::Image::New();
//image->DebugOn();
image2->Initialize(mitk::PixelType(typeid(int)), 3, dim2);
int *p2 = (int*)image2->GetData();
int size2 = dim2[0]*dim2[1]*dim2[2];
int i2;
for(i2=0; i2<size2; ++i2, ++p2)
*p2=i2;
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Constructor: ";
mitk::SymmetricForcesDemonsRegistration::Pointer symmetricForcesDemonsRegistration = mitk::SymmetricForcesDemonsRegistration::New();
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set Reference Image: ";
symmetricForcesDemonsRegistration->SetReferenceImage(image);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set Moving Image: ";
symmetricForcesDemonsRegistration->SetInput(image2);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set number of iterations: ";
symmetricForcesDemonsRegistration->SetNumberOfIterations(5);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set standard deviation: ";
symmetricForcesDemonsRegistration->SetStandardDeviation(1.0);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set save deformation field: ";
symmetricForcesDemonsRegistration->SetSaveDeformationField(false);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set deformation field file name: ";
symmetricForcesDemonsRegistration->SetDeformationFieldFileName("TestField.mhd");
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set save result image: ";
symmetricForcesDemonsRegistration->SetSaveResult(false);
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Set result image file name: ";
symmetricForcesDemonsRegistration->SetResultFileName("TestResult.mhd");
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Perform registration: ";
symmetricForcesDemonsRegistration->Update();
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Get the result image: ";
mitk::Image::Pointer resultImage = symmetricForcesDemonsRegistration->GetOutput();
std::cout<<"[PASSED]"<<std::endl;
std::cout << "Get the deformation field: ";
itk::Image<class itk::Vector<float, 3>,3>::Pointer deformationField = symmetricForcesDemonsRegistration->GetDeformationField();
std::cout<<"[PASSED]"<<std::endl;
return EXIT_SUCCESS;
} {
{
"mitkDemonsRegistrationTest",
mitkDemonsRegistrationTest
},
{
"mitkHistogramMatchingTest",
mitkHistogramMatchingTest
},
{
"mitkSymmetricForcesDemonsRegistrationTest",
mitkSymmetricForcesDemonsRegistrationTest
},
{0,0}
}
Definition at line 25 of file MitkDeformableRegistrationTestDriver.cpp.
1.7.2