mitkCalculateGrayValueStatisticsTool.h
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00001 /*========================================================================= 00002 00003 Program: Medical Imaging & Interaction Toolkit 00004 Language: C++ 00005 Date: $Date$ 00006 Version: $Revision: 1.0 $ 00007 00008 Copyright (c) German Cancer Research Center, Division of Medical and 00009 Biological Informatics. All rights reserved. 00010 See MITKCopyright.txt or https://www.mitk.org/copyright.html for details. 00011 00012 This software is distributed WITHOUT ANY WARRANTY; without even 00013 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 00014 PURPOSE. See the above copyright notices for more information. 00015 00016 =========================================================================*/ 00017 00018 #ifndef mitkCalculateGrayValueStatisticsTool_h_Included 00019 #define mitkCalculateGrayValueStatisticsTool_h_Included 00020 00021 #include "mitkCommon.h" 00022 #include "MitkExtExports.h" 00023 #include "mitkSegmentationsProcessingTool.h" 00024 00025 #include <itkImage.h> 00026 #include <sstream> 00027 00028 namespace mitk 00029 { 00030 00040 class MitkExt_EXPORT CalculateGrayValueStatisticsTool : public SegmentationsProcessingTool 00041 { 00042 public: 00043 00044 Message<> StatisticsCompleted; 00045 00046 mitkClassMacro(CalculateGrayValueStatisticsTool, SegmentationsProcessingTool); 00047 itkNewMacro(CalculateGrayValueStatisticsTool); 00048 00049 virtual const char** GetXPM() const; 00050 virtual const char* GetName() const; 00051 00052 virtual std::string GetReport() const; 00053 // 00054 // Insight/Code/Review/Algorithms version of Histogram takes 00055 // only one template parameter, and the 'release' version 00056 // takes 2, but the default value for the second, 1, is what 00057 // was specified here. 00058 typedef itk::Statistics::Histogram<double> HistogramType; 00059 HistogramType::Pointer m_ITKHistogram; 00060 00061 HistogramType::ConstPointer GetHistogram(); 00062 00063 typedef HistogramType::MeasurementType HistogramMeasurementType; 00064 00065 protected: 00066 00067 CalculateGrayValueStatisticsTool(); // purposely hidden 00068 virtual ~CalculateGrayValueStatisticsTool(); 00069 00070 virtual void StartProcessingAllData(); 00071 virtual bool ProcessOneWorkingData( DataNode* node ); 00072 virtual void FinishProcessingAllData(); 00073 00074 virtual std::string GetErrorMessage(); 00075 00079 template<typename TPixel, unsigned int VImageDimension> 00080 void CalculateMinMax(itk::Image<TPixel, VImageDimension>* referenceImage, Image* segmentation, 00081 TPixel& minimum, TPixel& maximum); 00082 00087 template<typename TPixel, unsigned int VImageDimension> 00088 void ITKHistogramming(itk::Image<TPixel, VImageDimension>* referenceImage, Image* segmentation, 00089 std::stringstream& report); 00090 00091 std::stringstream m_CompleteReport; 00092 00093 }; 00094 00095 } // namespace 00096 00097 #endif 00098
