Screenshots

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Screenshots

Available Applications

The applications shown in these screenshots are part of the open-source version of MITK. You can test them by activating these functionalities in cmake, compiling and then starting the MainApp application.

Screenshots$THUMB slice based segmentation.png <
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A tool for manual segmentation of 3D images. You can draw binary images (segmentations) using a couple of simple tools, which all work on 2D slices of the original image (and have full undo support). A simple interpolation of missing slices is offered, as well as volume calculation and surface creation by marching cubes. more details


Screenshots$THUMB rigid registration.png <
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The rigid registration tool gives an interface for performing different kinds of automatic 2D-2D and 3D-3D matching algorithms. The application lets the user load and select different volumes for registration. An overlay of the images are shown in the windows. To make the differences between the images more clearly, the color of the datasets can be set to red and green instead of both in grey values. The geometry of the moving image is updated for every iteration step during registration process and shown in the windows. The resulting transformed image can be saved. The set of parameters which were specified for registration can be saved as a preset for later use and loaded again.


Screenshots$THUMB point based registration.png <
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The point based registration tool gives an interface for setting points in two datasets and perform a registration corresponding to these points. . The application lets the user load and select different datasets for registration. An overlay of the datasets are shown in the windows. To make the differences between the datasets more clearly, the color of the datasets can be set to red and green instead of both in grey values. The resulting transformed dataset can be saved. The set of points which were specified for a dataset can be saved for later use and loaded again.

More screenshots of possible applications

These screenshots are made with MITK. However, the shown functionalities (program modules) are not part of the open source version that you can download.

Screenshots$THUMB interactive fastmarching level set tool.png <
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The application lets the user interactively delineate 3D data based on the Fast Marching Level Set Method. For the Level Set initialization seed points need to be defined (shown as crosses in the upper left window). During propagation of the segmentation the user gets feedback by previewing the intermediary results in the 2D orthogonal slices as well as a surface in the 3D window (bottom right).


Screenshots$THUMB vesselTool.png <
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An application for the inspection of vessels by cutting planes orthogonal to their trajectories. In the MPR view, the origin of the plane is indicated by the colored lines. In the right view a surface reconstruction of the aorta is visualized in combination with the orthogonal plane (yellow).