Publications
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International Publications
2020
- High Doses of Photons and Carbon Ions Comparably Increase Vascular Permeability in R3327-HI Prostate Tumors: A Dynamic Contrast-Enhanced MRI Study
Radiation Research - Alina L Bendinger et al. High Doses of Photons and Carbon Ions Comparably Increase Vascular Permeability in R3327-HI Prostate Tumors: A Dynamic Contrast-Enhanced MRI Study. Radiat Res (2020) 194 (5): 465–475. Link
2019
- Bolus arrival time estimation in dynamic contrast-enhanced magnetic resonance imaging of small animals based on spline models
Physics in Medicine & Biology - Alina L Bendinger et al. Bolus arrival time estimation in dynamic contrast-enhanced magnetic resonance imaging of small animals based on spline models. 2019 Phys. Med. Biol. 64 045003. Link
- Investigation of hypoxia in syngeneic rat prostate tumors after irradiation with photons or carbon ions by multimodal imaging and histology
The Faculty of Bio Sciences, Heidelberg University - Alina L Bendinger. 2019. Link
- Relaxation-compensated amide proton transfer (APT) MRI signal intensity is associated with survival and progression in high-grade glioma patients
- Paech, D., Dreher, C., Regnery, S. et al. Relaxation-compensated amide proton transfer (APT) MRI signal intensity is associated with survival and progression in high-grade glioma patients. Eur Radiol 29, 4957–4967 (2019) Link
- Relaxation-compensated APT and rNOE CEST-MRI of human brain tumors at 3 T
Magnetic Resonance in Medicine - Goerke, S, Soehngen, Y, Deshmane, A, et al. Relaxation-compensated APT and rNOE CEST-MRI of human brain tumors at 3 T. Magn Reson Med. 2019; 82: 622– 632. Link
2018
- Radiomic Machine Learning for Characterization of Prostate Lesions with MRI: Comparison to ADC
RSNA Radiology - David Bonekamp, Simon Kohl, et al. Radiomic Machine Learning for Characterization of Prostate Lesions with MRI: Comparison to ADC. Radiology 2018 289:1, 128-137. Link
- Radiomic subtyping improves disease stratification beyond key molecular, clinical, and standard imaging characteristics in patients with glioblastoma
Neuro-Oncology - Philipp Kickingereder, Ulf Neuberger, et al. Radiomic subtyping improves disease stratification beyond key molecular, clinical, and standard imaging characteristics in patients with glioblastoma. Neuro-Oncology, Volume 20, Issue 6, June 2018, Pages 848–857. Link
- Assessing the predictability of IDH mutation and MGMT methylation status in glioma patients using relaxation-compensated multipool CEST MRI at 7.0 T
Neuro-Oncology - Daniel Paech, Johannes Windschuh, et. al. Assessing the predictability of IDH mutation and MGMT methylation status in glioma patients using relaxation-compensated multipool CEST MRI at 7.0 T. Neuro-Oncology, Volume 20, Issue 12, December 2018, Pages 1661–1671. Link
2017
- Medical Research Data Management Using MITK and XNAT
Bildverarbeitung für die Medizin 2017 - Goch CJ, Metzger J, Nolden M. Medical Research Data Management Using MITK and XNAT. In: Maier-Hein, geb. Fritzsche K., Deserno, geb. Lehmann T., Handels H., Tolxdorff T. (eds) Bildverarbeitung für die Medizin 2017. Heidelberg: Springer (2017) 305-305.
- Tutorial: Medical Image Processing with MITK Introduction and new Developments
Bildverarbeitung für die Medizin 2017 - Goch CJ, Metzger J, Nolden M. Tutorial: Medical Image Processing with MITK Introduction and new Developments. In: Maier-Hein, geb. Fritzsche K., Deserno, geb. Lehmann T., Handels H., Tolxdorff T. (eds) Bildverarbeitung für die Medizin 2017. Heidelberg: Springer (2017) 10-10.
- Upper ankle joint space detection on low contrast intraoperative fluoroscopic C-arm projections
SPIE Medical Imaging 2017 - Thomas S, Schnetzke M, Brehler M, Swartman B, Vetter Sven, Franke J, Grützner PA, Meinzer HP, Nolden M. Upper ankle joint space detection on low contrast intraoperative fluoroscopic C-arm projections. Proc. SPIE 10135, Medical Imaging 2017: Image-Guided Procedures, Robotic Interventions, and Modeling, 2017.
2016
- MITK-OpenIGTLink for combining open-source toolkits in real-time computer-assisted interventions
International Journal of Computer Assisted Radiology and Surgery - Klemm M, Kirchner T, Gröhl J, Cheray D, Nolden M, Seitel A, Hoppe H, Maier-Hein L, Franz AM. MITK-OpenIGTLink for combining open-source toolkits in real-time computer-assisted interventions, Int J Comput Assist Radiol Surg. 2017, 2016;12(3):351-361.
- Suggesting Optimal Delineation Planes for Interactive 3D Segmentation
Bildverarbeitung für die Medizin 2016 - Fetzer A, Riecker N, Metzger J, Goch C, Meinzer HP, Nolden M. Suggesting Optimal Delineation Planes for Interactive 3D Segmentation. In: Tolxdorff T., Deserno T., Handels H., Meinzer HP. (eds) Bildverarbeitung für die Medizin 2016. Informatik aktuell. Springer Vieweg, Berlin, Heidelberg
- Towards an open-source semantic data infrastructure for integrating clinical and scientific data in cognition-guided surgery
SPIE Medical Imaging 2016 - Fetzer A, Metzger J, Katic D, März K, Wagner M Philipp P, Engelhardt S, Weller T, Zelzer S, Fran AM, Schoch N, Heuveline V, Maleshkova M, Rettinger A, Speidel S, Wolf I, Kenngott H, Mehrabi A, Müller-Stich BP, Maier-Hein L, Meinzer HP, Nolden M. Towards an open-source semantic data infrastructure for integrating clinical and scientific data in cognition-guided surgery. Proc. SPIE 9789, Medical Imaging 2016: PACS and Imaging Informatics: Next Generation and Innovations.
2014
- MITK-US: real-time ultrasound support within MITK
International Journal of Computer Assisted Radiology and Surgery - März K, Franz AM, Seitel A, Winterstein A, Bendl R, Zelzer S, Nolden M, Meinzer HP, Maier-Hein L. MITK-US: real-time ultrasound support within MITK. Int J Comput Assist Radiol Surg. 2014 (411-420)
- The Battle Between Amino Acid PET and Functional MRI: Precision of Tumor Delineation Examined by Glioma Progression Pattern After Radiation Therapy
International Journal of Radiation Oncology• Biology• Physics - Debus C, Combs S, Floca R, Maier-Hein K, Nolden M, Schwager C, Radbruch A, Lutz K, Jäkel O, Wick W, Bendszus M, Heiland S, Haberkorn U, Debus J, Abdollahi A. The Battle Between Amino Acid PET and Functional MRI: Precision of Tumor Delineation Examined by Glioma Progression Pattern After Radiation Therapy. International Journal of Radiation Oncology• Biology• Physics
- Interventional real-time ultrasound imaging with an integrated electromagnetic field generator
International Journal of Computer Assisted Radiology and Surgery - März K, Franz AM, Seitel A, Winterstein A, Hafezi M, Saffari A, Bendl R, Stieltjes B, Meinzer HP, Mehrabi A, Maier-Hein L, Interventional real-time ultrasound imaging with an integrated electromagnetic field generator, Int J Comput Assist Radiol Surg. 2014 Mar 25.
- Using linked data and web APIs for automating the pre-processing of medical images
Proceedings of the 5th International Conference on Consuming Linked Data - Gemmeke P, Maleshkova M, Philipp P, Götz M, Weber C, Kämpgen B, Nolden M, Maier-Hein K, Rettinger A. Using linked data and web APIs for automating the pre-processing of medical images. Proceedings of the 5th International Conference on Consuming Linked Data-Volume 1264.
2013
- The Medical Imaging Interaction Toolkit: challenges and advances
International Journal of Computer Assisted Radiology and Surgery 2013 - Nolden M, Zelzer S, Seitel A, Wald D, Müller M, Franz AM, Maleike D, Fangerau M, Baumhauer M, Maier-Hein L, Maier-Hein KH, Meinzer HP and Wolf I, The Medical Imaging Interaction Toolkit: challenges and advances, Int J Comput Assist Radiol Surg. 2013 Apr 16. [Epub ahead of print] Link
2012
- MITK Diffusion Imaging
Methods of Information in Medicine - Maier-Hein (né Fritzsche) KH, Neher PF, Reicht I, Van Bruggen T, Goch CJ, Reisert M, Nolden M, Zelzer S, Meinzer HP, Stieltjes B, MITK Diffusion Imaging Method Inform Med, 51(5):441-8, 2012.
- MITK Global Tractography
SPIE Medical Imaging 2012 - Neher PF, Stieltjes B, Reisert M, Reicht I, Meinzer HP, Fritzsche KH, MITK Global Tractography, SPIE Medical Imaging 2012.
- Simplified development of image-guided therapy software with MITK-IGT
SPIE Medical Imaging 2012 - Franz AM, Seitel A, Servatius M, Zöllner C, Gergel I, Wegner I, Neuhaus J, Zelzer S, Nolden M, Gaa J, Mercea P, Yung K, Sommer CM, Radeleff BA, Schlemmer HP, Kauczor HU, Meinzer HP and Maier-Hein L. Simplified development of image-guided therapy software with MITK-IGT. Proceedings of SPIE 8316, 83162J (2012). Link
2011
- MITK-ToF - Range data within MITK
International Journal of Computer Assisted Radiology and Surgery 2011 - Seitel, A.; Yung, K.; Mersmann, S.; Kilgus, T.; Groch, A.; Santos, T. R. D.; Franz, A. M.; Nolden, M.; Meinzer, H.-P. & Maier-Hein, L. MITK-ToF -- Range data within MITK Int J CARS, 2011, 7(1), 87-96. Link
2010
- The extensible open-source rigid and affine image registration module of the Medical Imaging Interaction Toolkit (MITK)
Comput Methods Programs Biomed - Daniel Stein, Klaus H. Fritzsche, Marco Nolden, Hans-Peter Meinzer, Ivo Wolf. The extensible open-source rigid and affine image registration module of the Medical Imaging Interaction Toolkit (MITK). Comput Methods Programs Biomed, 2010 Apr 19., dx.doi.org/10.1016/j.cmpb.2010.02.008. Link
- MITK-DI - A new diffusion imaging component for MITK
Bildverarbeitung für die Medizin 2010 - Fritzsche K, Meinzer H-P. MITK-DI - A new diffusion imaging component for MITK. In Deserno TM, Handels H, Meinzer HP, Tolxdorff T (eds). Bildverarbeitung für die Medizin 2010. Heidelberg: Springer (2010) 246-250.
- The MITK image guided therapy toolkit and its application for augmented reality in laparoscopic prostate surgery
Proceedings SPIE 2010 - Baumhauer M, Neuhaus J, Fritzsche KH, Meinzer HP. The MITK image guided therapy toolkit and its application for augmented reality in laparoscopic prostate surgery, Proc. SPIE, 7625, 76251G, 2010.
Before 2010
- Numerical Q-Ball Image Reconstruction: an ITK Implementation
Insight Journal, Jan-Jun (2009) - Fritzsche K, Meinzer H. Numerical Q-Ball Image Reconstruction: an ITK Implementation. The Insight Journal, Jan-Jun (2009). Link
- Interactive segmentation framework of the Medical Imaging Interaction Toolkit
Computer Methods and Programs in Biomedicine - Maleike D, Nolden M, Meinzer HP, Wolf I. Interactive segmentation framework of the Medical Imaging Interaction Toolkit. Comput Meth Prog Bio., Volume 96, Issue 1, Oct. 2009, Pages 72-83 . Link
- The Medical Imaging Interaction Toolkit
Medical Image Analysis - Wolf I, Vetter M, Wegner I, Böttger T, Nolden M, Schöbinger M, Hastenteufel M, Kunert T, Meinzer HP. The Medical Imaging Interaction Toolkit. Med Image Anal. 2005 Dec;9(6):594-604. Link
- The MITK Approach
Insight Journal - Wolf I., Nolden M., Böttger T., Wegner I., Schöbinger M., Hastenteufel M., Heimann T., Meinzer H., Vetter M.. The MITK Approach. Insight Journal - 2005 MICCAI Open-Source Workshop. Link
- The Medical Imaging Interaction Toolkit (MITK) – a toolkit facilitating the creation of interactive software by extending VTK and ITK
SPIE 2004 - Ivo Wolf, Marcus Vetter, Ingmar Wegner, Marco Nolden, Thomas Böttger, Mark Hastenteufel, Max Schöbinger, Tobias Kunert, Hans-Peter Meinzer. The Medical Imaging Interaction Toolkit (MITK) – a toolkit facilitating the creation of interactive software by extending VTK and ITK. Medical Imaging 2004: Visualization, Image-Guided Procedures, and Display. Proceedings of the SPIE, Volume 5367, pp. 16-27 (2004). PDF
German publications
2013
- MITK-US: Echtzeitverarbeitung von Ultraschallbildern in MITK.
Bildverarbeitung für die Medizin 2013 - Franz AM, März K, Seitel A, Müller M, Zelzer S, Nodeln M, Meinzer H-P, Maier-Hein L; MITK-US: Echtzeitverarbeitung von Ultraschallbildern in MITK. In Deserno TM, Handels H, Meinzer HP, Tolxdorff T (eds). Bildverarbeitung für die Medizin 2013. Heidelberg: Springer (2013). 302-307.
2011
- MITK-ToF: Time-of-Flight Kamera-Integration in das Medical Imaging Interaction Toolkit.
Bildverarbeitung für die Medizin 2011 - Yung, K.; Seitel, A.; Mersmann, S.; Meinzer, H.-P. & Maier-Hein, L. Handels, H.; Erhardt, J.; Deserno, T.; Meinzer, H.-P. & Tolxdorff, T. (ed.) MITK-ToF: Time-of-Flight Kamera-Integration in das Medical Imaging Interaction Toolkit Bildverarbeitung für die Medizin, 2011, 204-208. Link
Before 2010
- MITK-IGT: Eine Navigationskomponente für das Medical Imaging Interaction Toolkit.
Bildverarbeitung für die Medizin 2009 - Neuhaus, J.; Wegner, I.; Kast, J.; Baumhauer, M.; Seitel, A.; Gergel, I.; Nolden, M.; Maleike, D.; Wolf, I.; Meinzer, H.-P. & Maier-Hein, L. Meinzer, H.-P.; Deserno, T.; Handels, H. & Tolxdorff, T. (ed.) MITK-IGT: Eine Navigationskomponente für das Medical Imaging Interaction Toolkit. Bildverarbeitung für die Medizin, Springer, 2009, 454-458. Link
- Konzept und Realisierung eines Zustandsmaschinen-Editors fuer Interaktionen medizinischer Bildverarbeitung mit Debug-Funktionalität
Bildverarbeitung für die Medizin 2008 - Stein D, Vetter M, Wolf I, Meinzer HP. Konzept und Realisierung eines Zustandsmaschinen-Editors für Interaktionen medizinischer Bildverarbeitung mit Debug-Funktionalität. In Tolxdorff T, Braun J, Deserno TM, Handels H, Horsch A, Meinzer H-P (eds). Bildverarbeitung für die Medizin 2008. Heidelberg: Springer (2008) 422-426. PDF
- Ein generisches Interaktionskonzept mit Undo für die medizinische Bildverarbeitung
Bildverarbeitung für die Medizin 2004 - Wegner I, Vetter M, Wolf I, Meinzer HP. Ein generisches Interaktionskonzept mit Undo für die medizinische Bildverarbeitung. In Tolxdorff T, Braun J, Handels H, Horsch A, Meinzer HP (eds). Bildverarbeitung für die Medizin 2004. Berlin: Springer (2004) 150-154 (ISBN: 3-540-21059-8). PDF
- Entwurf und Realisation eines generischen Interaktionsmodells mit Undo-Funktionaliät für die medizinische Bildverarbeitung
DKFZ Technical Report 2003 - Wegner I. Technical Report 143: Entwurf und Realisation eines generischen Interaktionsmodells mit Undo-Funktionalität für die medizinische Bildverarbeitung. DKFZ Heidelberg, Div. of Medical and Biological Informatics, 2003. PDF