Difference between revisions of "DiffusionImaging"

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#REDIRECT [[MitkDiffusion]]
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= MITK-[[DiffusionApp]] [PRE-RELEASE] =
 
 
 
'''Future links are written in ''italics'' and will be accessible after the application release.'''
 
 
 
[https://www.mitk.org/wiki/MitkGit direct link to source code]
 
 
 
[[#Downloads|direct link to download section]]
 
 
 
[[Media:DiffusionImaging$MITK_DIsmall.png|DI_App|Icon|align="right"]]
 
 
 
The MITK-Diffusion application offers a selection of image analysis algorithms for the processing of diffusion-weighted MR images. It encompasses the research of the [http://www.dkfz.de/en/mbi/projects/neuroimaging.html Neuroimaging Group] in the Division Medical and Biological Informatics at the German Cancer Research Center (dkfz).
 
 
 
 
 
<pre><nowiki>#!wiki caution
 
'''Features & Highlights'''
 
 
 
* Tensor and q-ball reconstruction
 
* Glyph visualization
 
* Quantification and partial volume clustering of tensor and q-ball images
 
* Global fiber tractography, visualization, and tract post-processing
 
* Brain network statistics and visualization (connectomics)
 
* Interactive exploration of Tract-based spatial statistics (TBSS) results
 
* Intra-voxel incoherent motion (IVIM) estimation
 
 
 
</nowiki></pre>
 
 
 
 
 
The MITK-Diffusion application is based on the [https://www.mitk.org/wiki/ResearchPlatform MITK research platform] and the most of it is open-source. Solely the tract-based spatial statistics viewer and the brain network statistics module were not released yet, mainly due to some major internal changes expected in the near future. The available code is embedded into the source code of MITK as a module and can be accessed through the [https://www.mitk.org/wiki/MitkGit public git repository].
 
 
 
== User manual ==
 
You can access the ''MITK-Diffusion online documentation here''
 
 
 
You can download the ''MITK-Diffusion information brochure here''
 
 
 
== Media ==
 
 
 
'''Publication:''' ''MITK-DI - A new diffusion imaging component for MITK.'' In Deserno TM, Handels H, Meinzer HP, Tolxdorff T (eds). Bildverarbeitung für die Medizin 2010. Heidelberg: Springer (2010) 246-250  <<BR>>
 
'''Authors:''' Fritzsche KH<sup>1</sup>, Meinzer H-P<sup>1</sup><<BR>>
 
'''Institution:''' <sup>1</sup>German Cancer Research Institute
 
 
 
== Downloads ==
 
 
 
Version 1.0 ( Release data: ''TBA'' )
 
 
 
* Windows
 
** ''x86_installer''
 
** ''x64_installer''
 
* Linux
 
** ''x86''
 
** ''x86_64''
 
* Mac OS X
 
** ''universal dmg''
 
 
 
== Contact ==
 
 
 
If you have questions about the application or if you would like to give us feedback, don't hesitate to [http://www.dkfz.de/en/mbi/people/Klaus_Fritzsche.php contact us].
 

Latest revision as of 12:35, 24 August 2018

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